Learn / Metabolism

Metabolic pathways

Every FMK pathway as a clickable map. Pick one pathway to hammer it — next step, enzyme, regulator, cofactor, and the facts that get tested (NADPH and who needs it, rate-limiting steps, deficiencies) — or set it to all pathways for a mixed drill. Every answer says which enzyme and which pathway.

Pathway
Ethanol metabolism · Hepatocyte cytosol (ADH), mitochondria (ALDH2), smooth ER (MEOS/CYP2E1), peroxisome (catalase). Enzymes sit beside the arrows, ★ = rate-limiting, ⊕/⊖ = activators/inhibitors (toggle), −ATP +NADH = what the step spends and makes (toggle ⚡), dashed = allosteric signal, shaded bands = compartment. Drag to pan.
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EthanolEthanolMEOS — CYP2E1 (smooth ER)MEOS — CYP2E1 (smoothER)ADH (cytosol) — main routeADH (cytosol) — mainrouteCatalase (peroxisome)Catalase (peroxisome)AcetaldehydeAcetaldehydeAcetateAcetate↑ NADH / NAD⁺ ratio↑ NADH / NAD⁺ ratioAcetyl-CoAAcetyl-CoAPyruvate → lactatePyruvate → lactateOAA → malateOAA → malateDHAP → glycerol-3-P → TGDHAP → glycerol-3-P → TG↓ β-oxidation↓ β-oxidation↑ Ketogenesis↑ KetogenesisMEOS — CYP2E1 (smooth ER)Alcohol dehydrogenase (ADH)Catalase (peroxisomal)Ethanol + NAD⁺ → acetaldehyde+ NADH + H⁺ NAD⁺ → NADHCYP2E1: ethanol + NADPH + H⁺ +O₂ → acetaldehyde + NADP⁺ + 2H₂O NADPH → NADP⁺Peroxisomal oxidationAldehyde dehydrogenase (ALDH2,mitochondrial)⊖ Disulfiram, Metronidazole NAD⁺ → NADHNet: 2 NADH per ethanolAcetyl-CoA synthetase(peripheral tissues) ATP → ADPLactate dehydrogenase drivenforward NADH → NAD⁺Malate dehydrogenase drivenbackwards NADH → NAD⁺Glycerol-3-P dehydrogenasedriven forward NADH → NAD⁺3-Hydroxyacyl-CoAdehydrogenase inhibitedHMG-CoA synthase / lyase(mitochondria)CytosolSmooth ERPeroxisomeCytosol → mitochondrionMitochondrion

Ethanol metabolism

Three routes converge on acetaldehyde: ADH in the cytosol (NAD⁺ → NADH, the main one), MEOS/CYP2E1 in the smooth ER (NADPH + O₂, inducible, makes ROS), and peroxisomal catalase (minor). ALDH2 then makes acetate → acetyl-CoA. Two NADH per ethanol flood the liver: pyruvate → lactate, OAA → malate, DHAP → glycerol-3-P, β-oxidation inhibited. Result: hypoglycemia (fasting), lactic acidosis, steatosis, ketoacidosis.

Click any metabolite on the map for its reactions. Source: FMK-03.4 Fructose, galactose & ethanol.

Reactions

StepEnzymeCofactorsRegulation
Ethanol → ADH (cytosol) — main route Alcohol dehydrogenase (ADH)Methanol poisoning →Ethylene glycol (antifreeze) poisoning → —
ADH (cytosol) — main route → Acetaldehyde Ethanol + NAD⁺ → acetaldehyde + NADH + H⁺ NAD⁺ → NADH
Ethanol → MEOS — CYP2E1 (smooth ER) MEOS — CYP2E1 (smooth ER) —
MEOS — CYP2E1 (smooth ER) → Acetaldehyde CYP2E1: ethanol + NADPH + H⁺ + O₂ → acetaldehyde + NADP⁺ + 2 H₂O NADPH → NADP⁺, O₂
Ethanol → Catalase (peroxisome) Catalase (peroxisomal) —
Catalase (peroxisome) → Acetaldehyde Peroxisomal oxidation H₂O₂ → H₂O
Acetaldehyde → Acetate Aldehyde dehydrogenase (ALDH2, mitochondrial)
ALDH2 polymorphism / disulfiram — acetaldehyde accumulation: flushing, headache, nausea, hypotension after drinking
ALDH2 deficiency ('Asian flush', rs671) →Disulfiram (Antabuse) - acetaldehyde reaction →
NAD⁺ → NADH
− Disulfiram; Metronidazole
Acetate → Acetyl-CoA Acetyl-CoA synthetase (peripheral tissues) ATP
Acetaldehyde → ↑ NADH / NAD⁺ ratio Net: 2 NADH per ethanol —
↑ NADH / NAD⁺ ratio → Pyruvate → lactate Lactate dehydrogenase driven forward NADH → NAD⁺
↑ NADH / NAD⁺ ratio → OAA → malate Malate dehydrogenase driven backwards NADH → NAD⁺
↑ NADH / NAD⁺ ratio → DHAP → glycerol-3-P → TG Glycerol-3-P dehydrogenase driven forward NADH → NAD⁺
↑ NADH / NAD⁺ ratio → ↓ β-oxidation 3-Hydroxyacyl-CoA dehydrogenase inhibited —
Acetyl-CoA → ↑ Ketogenesis HMG-CoA synthase / lyase (mitochondria) —

Conditions that live on this map

Alcohol-induced (alcoholic) hypoglycemiaAlcoholic liver disease (steatosis → hepatitis → fibrosis → cirrhosis)ALDH2 deficiency ('Asian flush', rs671)Disulfiram (Antabuse) - acetaldehyde reactionEthylene glycol (antifreeze) poisoningMethanol poisoning

Blue pills sit on one specific arrow; grey ones are whole-pathway problems. Each opens the full condition card, which links back here with the arrow lit.

Facts worth knowing

Enzyme deficiency

  • Alcoholic hepatitis lab pattern — AST > ALT (≥2:1; alcohol depletes PLP, ALT needs more), ↑GGT, ↑MCV, ↑bilirubin, ↑INR
  • Alcoholic ketoacidosis vs DKA — the glucose clue — AKA: glucose normal or low, β-OHB ≫ acetoacetate; DKA: glucose high. AKA needs fluids + glucose + thiamine, no insulin
  • Drug that irreversibly inhibits ALDH for aversive therapy — Disulfiram — 'FIRES up acetaldehyde accumulation'
  • Deficiency of Aldehyde dehydrogenase (ALDH2, mitochondrial) causes… — ALDH2 polymorphism / disulfiram — acetaldehyde accumulation: flushing, headache, nausea, hypotension after drinking (ALDH2*2 (rs671, ~40% of East Asians) → acetaldehyde accumulates → flushing, nausea, tachycardia (same as disulfiram); ↑ esophageal cancer risk.)

Regulation

  • Order of treatment in a hypoglycemic chronic drinker — Thiamine FIRST, then dextrose — glucose without B₁ can precipitate Wernicke encephalopathy
  • The three hepatic routes from ethanol to acetaldehyde — ADH (cytosol, NAD⁺, main route), MEOS/CYP2E1 (smooth ER, NADPH + O₂, inducible, ROS), catalase (peroxisome, H₂O₂, minor)
  • Which of the three ethanol routes does NOT contribute to the NADH/NAD⁺ shift — MEOS — it spends NADPH. All the hypoglycemia, lactate and steatosis come from ADH + ALDH

Cofactor

  • Which pathway uses NADPH instead of NAD⁺ to oxidise ethanol? — MEOS (CYP2E1) — inducible, generates ROS
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