Learn / Metabolism
Metabolic pathways
Every FMK pathway as a clickable map. Pick one pathway to hammer it — next step, enzyme, regulator, cofactor, and the facts that get tested (NADPH and who needs it, rate-limiting steps, deficiencies) — or set it to all pathways for a mixed drill. Every answer says which enzyme and which pathway.
Heme synthesis (porphyrias)
Hydroxymethylbilane (linear tetrapyrrole)
Made from Porphobilinogen (PBG) by PBG deaminase (hydroxymethylbilane synthase, HMBS)
PBG deaminase (hydroxymethylbilane synthase, HMBS) — Heme synthesis (porphyrias)
Deficiency: Acute intermittent porphyria (AD, ~50% activity) — colicky abdominal pain without peritoneal signs, vomiting, neuropsychiatric symptoms, motor neuropathy, tachycardia/hypertension; urine darkens to port-wine on standing; markedly ↑ urine PBG (and ALA); no photosensitivity; attacks after P450 inducers, OCPs/luteal phase, fasting; treat with IV hemin, IV glucose, givosiran
4 PBG → linear tetrapyrrole. Still BEFORE ring closure — accumulated ALA/PBG are not photoactive.
Condition cards:Acute intermittent porphyria (AIP) →
Becomes Uroporphyrinogen III via Uroporphyrinogen III synthase (cosynthase)
Uroporphyrinogen III synthase (cosynthase) · irreversible — Heme synthesis (porphyrias)
Deficiency: Congenital erythropoietic porphyria (Günther, AR) — hydroxymethylbilane cyclises non-enzymatically into the dead-end type I isomer; severe photosensitivity and mutilation from infancy, red urine, erythrodontia
RING CLOSURE — the line that separates neurovisceral (before) from cutaneous (after) porphyrias.
Condition cards:Congenital erythropoietic porphyria (Gunther disease, CEP) →